| Pairwise comparison of genotypes | Upregulated genes & associated processes | Downregulated genes & associated processes |
|---|---|---|
| Resistant vs Susceptible (control point, 0 hpi) | Oxidation reduction and associated terms. | 信号,磷酸化和相关条款。Oxidoreductase activity (small group of DEGs) |
| Resistant at 24 hpi (water) vs Resistant before inoculation | Regeneration after wounding (cell cycle, mitosis, etc.) | Signaling, protein modification and associated terms probably reflecting metabolism reprogramming toward the stress response. |
| Resistant at 24 hpi (GPCN) vs Resistant before inoculation | Variety of stress-response related terms (responses to stimuli, oxidative stress, peroxidase activity, glycosylases, endopeptidase inhibitors, etc.) Photosynthesis-related genes (probably related to organelle division in the frame of cell division and elongation processes). |
Signaling, protein modification and associated terms probably reflecting metabolism reprogramming toward the stress response. |
| Resistant at 72 hpi (water) vs Resistant at 24 hpi (water) | Small changes in spectrum of oxidoreductases. Nothing special at a large scale. | Reproduction, oxidation reduction, small changes in spectrum of oxidoreductases. Nothing special at a large scale. |
| Resistant at 72 hpi (GPCN) vs Resistant at 24 hpi (GPCN) | Variety of stress-response related terms (oxidation reduction, peroxidase activity, glycosylases, endopeptidases, proteases, ribonucleases, etc.) Cell wall biogenesis (cell division, elongation of cells during regeneration, or syncytium development) |
Photosynthesis, significant changes in metabolic processes, changes in oxidoreductases spectra. |
| Susceptible at 24 hpi (water) vs Susceptible before inoculation (0 hpi) | Response to various stimuli, cell cycle. Photosynthesis (probably related to plastid division in the frame of tissue regeneration after wounding or some changes in plastid metabolism). |
Signaling, protein modification and associated terms. Downregulation of a wide variety of regulatory and metabolic processes possibly reflecting metabolism reprogramming toward the stress response. |
| Susceptible at 24 hpi (GPCN) vs Susceptible before inoculation (0 hpi) | 细胞周期及相关术语s. Response to stimuli. | Signal transduction, downregulation of a wide variety of regulatory and metabolic processes. |
| Susceptible at 72 hpi (water) vs Susceptible at 24 hpi (water) | 细胞周期及相关术语s (mitosis, microtubule-based movement, etc.). Changes in spectra of oxidoreductases and hydrolyses activities, probably associated with metabolic reprogramming. | Small changes in signaling and oxidoreductases – associated activities. |
| Susceptible at 72 hpi (GPCN) vs Susceptible at 24 hpi (GPCN) | Cell cycle-related terms. Terms related to activation of metabolic processes (positive regulations of variety of activities). Various peptidase activities. | Small changes in oxidoreductases – associated activities, signal transduction, response to stimuli. |
| Resistant at 24 hpi (water) vs Susceptible at 24 hpi (water) | Cell cycle related terms. Response to stimuli. Stress response related terms (peroxidase activity, oxidoreductase activity, hydrolase activities). Plastid related terms. Higher expression level of some general metabolism-related genes (e.g., catalytic activity) | Nothing specific at large scale (e.g., photosynthesis related terms, response to stimuli, etc.) |
| Resistant at 72 hpi (water) vs Susceptible at 72 hpi (water) | Oxidation reduction related terms. Nothing special at a large scale. | Nothing specific at large scale (e.g., photosynthesis related terms) |
| Resistant at 24 hpi (GPCN) vs Susceptible at 24 hpi (GPCN) | Oxidation reduction, oxidoreductases – associated terms. Higher expression levels of photosynthesis related genes (probably reflecting changes in plastids). Peptidase inhibitor activity. | Nothing specific at large scale. Some changes in oxidoreductases – associated activities |
| Resistant at 72 hpi (GPCN) vs Susceptible at 72 hpi (GPCN) | Nothing specific at large scale. Some changes in oxidoreductases – associated activities. Peptidase inhibitor activity. | Nothing specific at large scale. Some changes in photosynthesis and oxidoreductases – associated activities, some peptidase inhibitor activities. |