| Phytochrome regulated transcription factors |
| VOZ |
VOZ2 |
VOZ2was identified as one of the highly conserved transcriptional factors in land plant genes that are PhyB-interacting factors [58]. |
| bHLH |
Phytochrome Interacting Factor3 (PIF3) |
The G-box, CACGTG, is a target sequence for PIF3 [59]. PIF3 plays important roles in the Phy-mediated light responses. This factor can regulate the downstream genes either positively or negatively [60]. InArabidopsis,PIF3 was suggested to play an important role in the control of flowering by the regulation ofCOandFTgene expression [61]. |
| bHLH |
Phytochrome Interacting Factor3-Like5 (PIL1) |
PIL5 interacts with the Pfr forms of Phytochrome A (PhyA) and Phytochrome B (PhyB) [62]. |
| FAR1 |
Far-Red Elongated Hypokotyls3/Far-Red-Impaired Response1 (FHY3/FAR1) |
Transcription factor FHY3/FAR1 modulates PhyA-signaling in higher plants [63]. Other investigations demonstrated that FHY3 plays a principal role in the circadian clock, heading date control and regulation of heading time throughELF4(EARLY FLOWERING4) [64]. |
| Myb/SANT; MYB-related |
RVE7/EPR1 |
RVE7/EPR1is regulated by both PhyA and PhyB and negatively regulates flowering [65]. |
| – |
SORLIP2AT and SORLIP1AT |
Sequences over-represented in the light-induced promoters SORLIP2AT and SORLIP1AT were identified in the PhyA-induced promoters [66]. |
| – |
RE1ASPHYA3 |
RE1ASPHYA3(RE1, putative repressor element) is a highly conserved motif in the most monocotPhyApromoters and is responsible for the Pfr-directed repression [67]; this motif was detected in certain other genes [68]. |
| Circadian-clock regulated transcription factors |
| AP2/RAV/B3 |
RAV1 |
RAV1is a negative component in the regulation of plant development [69]. |
| AP2/RAV/B3 |
TEMPRANILLO1 (TEM1) TEMPRANILLO2 (TEM2) |
TEM1andTEM2genes act as direct repressors ofFT[70]. |
| 我的相关 |
REVEILLE1 (RVE1) |
RVE1 is a morning-phased transcription factor that integrates the circadian clock and auxin pathways [71]. |
| Myb/SANT; MYB-related |
REVEILLE 8 (RVE8) |
RVE8promotes the expression of some evening element that contains clock genes and forms a negative feedback loop withPRR5[72,73]. |
| MYB |
Circadian Clock Associated 1 (CCA1); Late Elongated Hypocotyl (LHY) |
The MYB transcription factorsCCA1andLHYare some of the key genes in the central oscillator of the plant circadian clock [74]. LHY and CCA1 negatively regulateTOC1expression. |
| TCP |
CCA1 HIKING EXPEDITION (CHE) |
The TCP transcription factorCHEis a clock component that is partially redundant withLHYin the repression ofCCA1[75]. |
| Other light regulated transcription factors |
| GATA/tify |
GATA2 |
GATA2 directly regulates genes that respond to light [76]. |
| GATA/tify |
GATA12 |
GATA12 is involved in the regulation of many light-responsive genes [77,78]. |
| MADF;Trihelix |
GT-1 |
GT-1可以充当光响应转录因子[79]. |
| bHLH |
AtMYC2 |
AtMYC2 acts as a negative regulator of blue light–mediated photomorphogenic growth and blue and far-red-light–regulated gene expression [80]. |
| – |
BOXIIPCCHS |
BOXIIPCCHS was suggested to be essential for light regulation [29,81.]. |
| – |
TBOXATGAPB |
Mutations in TBOXATGAPB cause a reduction in light-activated transcription [82.,83.]. |
| – |
IBOXCORENT |
I-box core motif IBOXCORENT in the conserved DNA modular arrays is associated with the light-responsive promoter regions [84.]. |
| – |
LREBOXIIPCCHS1 |
Light responsive element LREBOXIIPCCHS1, which was detected in parsley, is required for light responsiveness [85.]. |
| – |
IBOXCORE |
Conserved sequence in the 5′ UTR of light-regulated genes IBOXCORE may be involved in the regulation of transcription by light and the circadian clock. This sequence was detected in both monocots and dicots [86.]. |
